02/20/2014: Elemental 0.83

elemental-0.83.tgz

Documentation: [HTML] [PDF]

New Functionality

Fundamental additions

  • Preliminary routines for the high-performance computation of pseudospectra
  • Distributed blocked reductions to lower/upper bidiagonal/Hessenberg form are now both fully supported
  • Large redesign of the Matrix and DistMatrix classes which includes support for arbitrary submatrix manipulation

Minor/incremental improvements

  • More performant and robust SDC via: try/catch guards around the matrix-sign functions, avoidance of unnatural process team splits, the introduction of many more accuracy and convergence tuning parameters, and the ability to optionally print status updates
  • Support was added for pivot metadata caching (this will eventually have a large effect on the performance of Clique)
  • Row and column pivot applications now support every matrix distribution
  • The QuasiDiagonal{Scale,Solve} routines were greatly extended
  • AlignWith no longer has an effect when the alignments are unchanged
  • Added Demmel, Fox-Li, and Helmholtz PML matrices
  • HermitianTridiagEig is now a routine

Instrumentation/visualization/testing

  • Added support for BMP/JPG/PNG/etc. visualization via Qt5
  • Colormaps can now be modified at runtime
  • The -no-gui option is now supported so that Qt5 can be used to write images to file even when no display server is running
  • Preliminary support for reading/writing matrices to/from file

Maintenance

Library bugfixes

  • Fixed bugs in SymmetricInverse, QuasiDiagonal{Scale,Solve}, and HermitianInertia
  • Fixed bug in Pseudoinverse scaling (also affected Skeleton)
  • Fixed edgecases in TwoNormEstimate
  • Fixed a bug in parallel one-norm computation
  • Fixed bugs in Matrix::Conjugate and several diagonal alignments
  • Fixed parallel Helmholtz matrix generation
  • Avoided assumption that VCComm members have the same rank in the owning group
  • Fixed bugs in {[VR,STAR],[STAR,VR]} <- [CIRC,CIRC] and [STAR,MR] <- [MC,MR] redistributions
  • Fixed a bug in the Trmm driver (noticed by Hal Finkel)

Maintenance/syntax

  • “ResizeTo” was shortened to “Resize”
  • A DEBUG_ONLY macro was added to replace #ifndef RELEASE guards
  • Variadic versions of {Logic,Runtime}Error were added
  • The computation of Householder reflectors was greatly simplified and the library now further breaks with LAPACK convention for complex reflectors so that zeros are introduced with (I-tau v v’) rather than (I-conj(tau) v v’)
  • Matrix view-types have been simplified

Documentation

  • The DistMatrix class finally now has fairly complete documentation
  • The lapack-like/ folder’s new organization is now reflected in the documentation
  • The REFERENCES file is now in bibtex form

Build system

  • Support for Intel compilers (>= 14.0.1) has been re-enabled
  • C++11 compiler flags are now automatically detected for most compilers
  • The configuration test for MPI_Comm_f2c was fixed
  • Drivers are now recompiled (rather than just relinked) when headers change
  • Vagrant files were added for Ubuntu 13.10 (Saucy)
  • Multiple toolchain files were added

Python interface

  • Several more routines were added (e.g., from the qr namespace)

MPI and Threading

  • Avoiding complex MPI by default due to two students running into problems with OpenMPI’s support for complex MPI_SUM

Thanks

  • Hal Finkel for reporting a mistake in a Trmm driver
  • Jed Brown and Satish Balay for reporting several instances of unused variables/typedefs